BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007C05SP1|AL425662
(702 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1530 1114 0.0
3x_Contig66 373 e-103
>3x_Contig1530
Length = 6216
Score = 1114 bits (556), Expect = 0.0
Identities = 657/701 (93%), Gaps = 2/701 (0%)
Strand = Plus / Plus
Query: 3 gggataaggattgwgctctaaggatcgggcagtgagggccttggtcagacgcggygggca 62
||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 3963 gggataaggattg-gctctaaggatcgggcagtgagggccttggtcagacgcggcgggca 4021
Query: 63 tgcttgtggactgtbttactgggcttgctcggtgggacggactgcttgcgggccttgtyg 122
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 4022 tgcttgtggactgtcttactgggcttgctcggtgggacggactgcttgcgggccttgtcg 4081
Query: 123 taga-ggcyttggtaggtctcttgtagaccgtngcttgctgcaattaacgatcaacttag 181
|||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 4082 tagacggccttggtaggtctcttgtagaccgtcgcttgctgcaattaacgatcaacttag 4141
Query: 182 aactggtacggacaaggggaatttgactgtttaattaaaawatagcattgcgatggtsag 241
|||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||| ||
Sbjct: 4142 aactggtacggacaaggggaatctgactgtctaattaaaacatagcattgcgatggtcag 4201
Query: 242 aaagtgatgttgaggcaatgtgatttctgcccagtgctctgaatgtgaaagtgaagaaat 301
||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 4202 aaagtgatgttgacgcaatgtgatttctgcccagtgctctgaatgtcaaagtgaagaaat 4261
Query: 302 tcaaccaagcgcgggtwaacggcgggagttactatgantntnttaaggtagncaaatgnc 361
|||||||||||||||| |||||||||||| ||||||| | | ||||||||| |||||| |
Sbjct: 4262 tcaaccaagcgcgggtaaacggcgggagtaactatgactctcttaaggtagccaaatgcc 4321
Query: 362 tcgtcatctaattagtgacgcgcatgaatggattaacgagattnccactgtccctatcta 421
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 4322 tcgtcatctaattagtgacgcgcatgaatggattaacgagattcccactgtccctatcta 4381
Query: 422 ctatctagggaaaccacagncaagggaacgggsttggsagaatsagcggggaaagaagac 481
|||||||| |||||||||| |||||||||||| |||| ||||| ||||||||||||||||
Sbjct: 4382 ctatctagcgaaaccacagccaagggaacgggcttggcagaatcagcggggaaagaagac 4441
Query: 482 cctgttgagcttgactntagtttganattgtgaagaganatagagggtgtagcataagtg 541
|||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 4442 cctgttgagcttgactctagtttgacattgtgaagagacatagagggtgtagcataagtg 4501
Query: 542 ggagctttggcgccagtgaaataccagtacctttatagtttntttacttattnaattaag 601
||||||| |||||||||||||||||| |||||||||||||| |||||||||| |||||||
Sbjct: 4502 ggagcttcggcgccagtgaaataccactacctttatagtttctttacttattcaattaag 4561
Query: 602 nggagtggnaattcattttccangttntagnattnaaagtnctatanggggtgatccggg 661
|||| | ||||||||||||| ||| ||| ||| ||||| ||||| ||| |||||||||
Sbjct: 4562 cggagctggaattcattttccacgttctagcattcaaagtcctatacgggctgatccggg 4621
Query: 662 ttgaagacattgtcaggtggggagtttggctggggcggcac 702
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 4622 ttgaagacattgtcaggtggggagtttggctggggcggcac 4662
>3x_Contig66
Length = 1023
Score = 373 bits (186), Expect = e-103
Identities = 222/233 (95%), Gaps = 3/233 (1%)
Strand = Plus / Minus
Query: 3 gggataaggattgwgctctaaggatcgggcagtgagggccttggtcagacgcggygggca 62
||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 235 gggataaggattg-gctctaaggatcgggcagtgagggccttggtcagacgcggcgggca 177
Query: 63 tgcttgtggactgtbttactgggcttgctcggtgggacggactgcttgcgggccttgtyg 122
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 176 tgcttgtggactgtcttactgggcttgctcggtgggacggactgcttgcgggccttgtcg 117
Query: 123 taga-ggcyttggtaggtctcttgtagaccgtngcttgctgcaattaacgatcaacttag 181
|||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 116 tagacggccttggtaggtctcttgtagaccgtcgcttgctgcaattaacgatcaacttag 57
Query: 182 aactggtacgga-caaggggaatttgactgtttaattaaaawatagcattgcg 233
|||||||||||| |||||||||| ||||||| ||||||||| |||||||||||
Sbjct: 56 aactggtacggaccaaggggaatctgactgtctaattaaaacatagcattgcg 4
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2062
Number of Sequences: 1807
Number of extensions: 2062
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 2
length of query: 702
length of database: 10,358,551
effective HSP length: 16
effective length of query: 686
effective length of database: 10,329,639
effective search space: 7086132354
effective search space used: 7086132354
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)